Insertion junction: CLIP2.078892_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078892
Chromosome:chromosome 12
Location:9414497
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g541250 NAR1E Putative nitrite transporter; (1 of 7) PTHR30520//PTHR30520:SF0 - FORMATE TRANSPORTER-RELATED // FORMATE TRANSPORTER 1-RELATED outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACGTTGGTCAGCGCGGTCGGCTCAATGGCTCAGGTTTATTCAGAGCTC
Internal bar code:TCGGTTCGCCGACCCTGGTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:679
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTCCTCGAGTATGCTGAC
Suggested primer 2:GACAATTGCGGCACAGGTTT