Insertion junction: CLIP2.078896_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078896
Chromosome:chromosome 1
Location:7723768
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g054300 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCACTGTTCGATCAACGGCAGCTGGATTCACTGTTCGATCAACGGCAGC
Internal bar code:GGGGGCTTGTCCGTCCAGTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2788
LEAP-Seq percent confirming:89.6552
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CCAATGCATACAGACTGCGC
Suggested primer 2:CGTTCCATTTTGCAGCACCA