Insertion junction: CLIP2.078898_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078898
Chromosome:chromosome 17
Location:1052432
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g703550 (1 of 5) IPR001025 - Bromo adjacent homology (BAH) domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTACGTGACACACGTACGGGCGCGACACAGCGACACAGCGCTGTTTCAGC
Internal bar code:GAATGCAGTGGATATGCTTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5125
LEAP-Seq percent confirming:98.5294
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTCTTTTGAGACGGGA
Suggested primer 2:GACCTGCAGCTTGAACTCCT