Insertion junction: CLIP2.078899_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078899
Chromosome:chromosome 10
Location:5142631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455500 GTF4 (1 of 2) PF17035 - Bromodomain extra-terminal - transcription regulation (BET); Global Transcription factor 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCATGGGAGCACCAGCTGCATGGGGACACCTCGCTCCCTTGCCCCGGC
Internal bar code:CTAGTGTAGTGGCCTTGTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1952
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:CCCGTCCGAGAAGTTGTTCA
Suggested primer 2:GCCAACTCACGAAGTCTCCA