Insertion junction: CLIP2.078900_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078900
Chromosome:chromosome 1
Location:1560206
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre01.g800030 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCAAGACAGCACTGCCTCTGGAGTCTGGAGGATTCCCTTGCCTGCTCGC
Internal bar code:TTTAATACACGAGCGTTTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:262
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GCATTGCGTGTGGTGAAGTT
Suggested primer 2:AACGGACACGCATGGTTACT