Insertion junction: CLIP2.078903_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078903
Chromosome:chromosome 2
Location:2574134
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g092750 RRM3,SSA18 Putative ribosomal RNA methyltransferase; (1 of 1) 2.1.1.296//2.1.1.57 - Methyltransferase cap2 / mRNA (nucleoside-2'-O)-methyltransferase // Methyltransferase cap1 / mRNA (nucleoside-2'-O)-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAACAGTTTGCAACGGCAGGGCAGGCGTGCGCGGCTGGTCGAAAGCCGG
Internal bar code:GGATCCAATGAGAGTGTGCGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4280
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:176
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:176

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTGTATTCGGCGGATA
Suggested primer 2:AAGCGGCGTAGACCTATTCG