Insertion junction: CLIP2.078910_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078910
Chromosome:chromosome 13
Location:3897857
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre13.g589800 (1 of 4) PTHR10110//PTHR10110:SF119 - SODIUM/HYDROGEN EXCHANGER // SODIUM/HYDROGEN EXCHANGER 5-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGGCAGGGAATCGAGGGAGGCAGAGGCGGGCGGACGGGGGCCCTACT
Internal bar code:TGTTCTGTAAAAAGTTCCATGG

Confirmation - LEAP-Seq

LEAP-Seq distance:616
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGCTTGCATGCCCAACAA
Suggested primer 2:GATGGACTTGAAGGGGGTGG