Insertion junction: CLIP2.078913_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078913
Chromosome:chromosome 10
Location:4134716
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre10.g448700 (1 of 1) K11650 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D (SMARCD) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTCATGGCGCCCCTCCTCCGCACCTTCACCTGCACCTCAACCCGCCCTA
Internal bar code:TTTACGAGATGGCGCCGCGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTTCCCGACAGCTCCTAT
Suggested primer 2:TTCACGTCCAGCTTCACTCC