Insertion junction: CLIP2.078916_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078916
Chromosome:chromosome 16
Location:2837938
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre16.g662800 PRP4 (1 of 1) K12662 - U4/U6 small nuclear ribonucleoprotein PRP4 (PRPF4, PRP4); Splicing factor, component of the U4/U6-U5 snRNP complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACAGGCAGCACCCACCGCTCCCGCTGTACAGGCGACACACGCCGTCCGA
Internal bar code:ACAGATTTCTCGCTAGAAAGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:19.0476
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CCCAAACCTCTCCCAACCTC
Suggested primer 2:TGGGGTGTTGCAAGGATGTT