Insertion junction: CLIP2.078919_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078919
Chromosome:chromosome 11
Location:2646461
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095079 (1 of 2) IPR000104//IPR011705 - Antifreeze protein, type I // BTB/Kelch-associated 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTTACAGCGATAAGTCTGCCTCTGCAATGGCGGTGCGGCAACAGGAGTG
Internal bar code:TTTTCCATATTACCTTTTACTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3364
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:77

Suggested primers for confirmation by PCR

Suggested primer 1:GGGCTTAGTCCACGGCTATC
Suggested primer 2:GCGCAGTGCAATGCAGATAA