Insertion junction: CLIP2.078921_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078921
Chromosome:chromosome 17
Location:5333126
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g738000 AGG2 Aggregation 2; (1 of 6) PTHR15907:SF21 - DUF614 FAMILY PROTEIN 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAACTTATAAGCTTAGACGAAACGCATATCCTTCACCTGCCAGCTGCTA
Internal bar code:GGCGTGGGGAAATTTGACATGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2185
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGTACGACGACGACTAC
Suggested primer 2:CTGTCGGGTTAGCGGTCTTT