Insertion junction: CLIP2.078924_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078924
Chromosome:chromosome 17
Location:1833423
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre17.g709400 (1 of 1) PTHR12894//PTHR12894:SF17 - CNH DOMAIN CONTAINING // TRANSFORMING GROWTH FACTOR-BETA RECEPTOR-ASSOCIATED PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGACCTGCTGCTCAGGCGAGTGTGTGTGCGGGCGAGTTGATGGCGG
Internal bar code:GTCTCCGGCGTATCAGGAAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:179
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGTAGCCGGGCTTAATTTGC
Suggested primer 2:AATCCCATCCCGTCGCATTT