Insertion junction: CLIP2.078925_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078925
Chromosome:chromosome 13
Location:2621142
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801534 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGATTTAGGGTCGTCTCCCACGCGATCAGGTCTGAGGGGTCGGGGCGTC
Internal bar code:TAGTGGCGTGAAGGCATATTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2150
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCCTGAGAAGAAGTGGG
Suggested primer 2:TTCTGTGTGACGTCGCGTAA