Insertion junction: CLIP2.078925_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078925
Chromosome:chromosome 13
Location:2621165
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801534 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCGTTGCAAGTCAGTTCAATTCATTTGTATGTAGCGCAATCTACTTGG
Internal bar code:TTCTGATTTAGGAGTAGAATAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1738
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTCTGTGTGACGTCGCGTAA
Suggested primer 2:CAGCCCTGAGAAGAAGTGGG