Insertion junction: CLIP2.078932_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078932
Chromosome:chromosome 1
Location:2950683
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018500 HAS1 (1 of 1) PTHR12215//PTHR12215:SF10 - PHOSPHOPANTETHEINE TRANSFERASE // L-AMINOADIPATE-SEMIALDEHYDE DEHYDROGENASE-PHOSPHOPANTETHEINYL TRANSFERASE; Holo-[acyl-carrier-protein] synthase 3'UTR
Cre01.g018550 CYG69 (1 of 70) 4.6.1.1 - Adenylate cyclase / ATP pyrophosphate-lyase; Adenylate/guanylate cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTTCACACAGCAAGCATTATACGAATGCAGAGCAACCACAGTCGATGT
Internal bar code:CATGGTCATAAGGAGGAAGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1955
LEAP-Seq percent confirming:72.7273
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTGGCAATACATCGCAGC
Suggested primer 2:GTGGTGACAACAGCGACAAC