Insertion junction: CLIP2.078936_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078936
Chromosome:chromosome 7
Location:4844534
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346150 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTATGCGAATGGCCAGTCTCGCGTACACGCGACTAGGTTTTAAGTATC
Internal bar code:AGTCGACATGACACGACCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:716
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AATCCTCAGACAGCAGCCAC
Suggested primer 2:GCTTGGTACTGGGCTCATGT