Insertion junction: CLIP2.078940_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078940
Chromosome:chromosome 15
Location:1436459
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g641650 HLM22 (1 of 4) PTHR10887:SF331 - HELICASE MOV10L1-RELATED; Histone-lysine N-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGTGGTGGCTGGGAGGCTGGGAGCCATGGCCGCGGTGGTGGACTGGTG
Internal bar code:TGATTTGTTATTGGAAACCCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1135
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCTCGGTTAGGCATGAGA
Suggested primer 2:CATGCAGCCGTACTCATTGC