Insertion junction: CLIP2.078941_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078941
Chromosome:chromosome 17
Location:3627645
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g725301 (1 of 3) IPR000504//IPR003954 - RNA recognition motif domain // RNA recognition motif domain, eukaryote 5'UTR
Cre17.g725350 PSL4,GLC2B Glucosidase IIb; (1 of 1) K08288 - protein kinase C substrate 80K-H (PRKCSH) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCGCCCAAGCAATCACGCCAAGTAGTACTGAAGCGTTCATCACTAACCC
Internal bar code:ACTGCTTTGGATTAAGGGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:4654
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:74
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:ATCTTTCGGTTCCACACGCT
Suggested primer 2:TCCTTGTCCTTCATCACGCC