Insertion junction: CLIP2.078943_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078943
Chromosome:chromosome 11
Location:2570661
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g095092 PSY1 Phytoene synthase; (1 of 1) K02291 - phytoene synthase (crtB) outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTCCCTGCTGCTCCCGGACTCGGGTGATGTGGTACAGGTTGGGAAGGGT
Internal bar code:CAACGGTTTACTGAGGAATGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:204
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGCAGGGCAATAGGAACT
Suggested primer 2:TGGACGACGTGGAAAGGAAG