Insertion junction: CLIP2.078946_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078946
Chromosome:chromosome 14
Location:1672711
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g618800 (1 of 13) PTHR13244//PTHR32523//PTHR32523:SF8 - ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 // FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACACGGGCGGGTCCATCCGGGGCCGAAACCCGAGATTGGGCGTTCCAAC
Internal bar code:TAGAAAGCACTCTAGTGCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2148
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTGCAACAATCAGATCG
Suggested primer 2:CCTCCCCTGTACGGTACTGA