Insertion junction: CLIP2.078951_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078951
Chromosome:chromosome 2
Location:4517916
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g106850 TPR6 (1 of 1) PTHR22904:SF289 - CARBOXYLATE CLAMP-TETRATRICOPEPTIDE REPEAT PROTEIN-RELATED; Tetratricopeptide-repeat protein 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCAGAGCCTGGAGTGAGGGGTGCGGGGCCGAGCAGGGCACCGCGTGA
Internal bar code:GGATCTCGGAGTCGACCGTTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TTACCTCACCACGTGACTGC
Suggested primer 2:AGCTCTCCGTTGACAAGGTG