Insertion junction: CLIP2.078956_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078956
Chromosome:chromosome 12
Location:5613036
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801435 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCAGTTGTGGAACAGCTAGCGTTATCAACAGTGGAGCCGGATGTTTG
Internal bar code:GTTAGAACTAGACATTTAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:2100
LEAP-Seq percent confirming:88.8889
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCATCGACATGGACCGAT
Suggested primer 2:AAATTCAGCAGGAGGCCCTC