Insertion junction: CLIP2.078960_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.078960
Chromosome:chromosome 11
Location:4321956
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre11.g482550 (1 of 34) IPR003072 - Orphan nuclear receptor, NOR1 type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCGCCCCCTGGGGCCTCCAGGCCGCCTCCCACGTGTACTGACGCCA
Internal bar code:AGTTTCGTCGGTACTTTTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:89
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTGCGATTGGATGGGAAA
Suggested primer 2:GCATCGTCCCCTTCTACCTG