Insertion junction: CLIP2.078961_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078961
Chromosome:chromosome 12
Location:6576533
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g538450 EPT1 CDP-Ethanolamine:DAG Ethanolamine phosphotransferase; (1 of 1) 2.7.8.1 - Ethanolaminephosphotransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAATGGTTTAAAAATACAATAAAGCGAGAGCTAGAACTCCAGGCAGAA
Internal bar code:TACCCAAATTGCCCGTCGGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1443
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CTATGAGGCCCACTAGCGTG
Suggested primer 2:ATCGGGTAGTTTGTTGCCGT