Insertion junction: CLIP2.078962_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.078962
Chromosome:chromosome 9
Location:1832850
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397850 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTTGGGCCTCCTGTTCAAACGTGTGGGGGTCGTTCAATCTTGAAAAC
Internal bar code:TGACTGATCATAGTAAACTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:4719
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGCGTCTGATCGTCATC
Suggested primer 2:ATTGACGGCATGGTGGTCAT