Insertion junction: CLIP2.078962_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078962
Chromosome:chromosome 9
Location:1832853
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g397850 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACAAGGCAAAGCTTCACCTTGCAGTATCATTGCTGCGGAAGAGCGCTT
Internal bar code:TGACTGATCATAGTAAACTACT

Confirmation - LEAP-Seq

LEAP-Seq distance:1855
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGACGGCATGGTGGTCAT
Suggested primer 2:AGTGGCGTCTGATCGTCATC