Insertion junction: CLIP2.078968_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078968
Chromosome:chromosome 3
Location:397300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144807 MAS1 (1 of 1) 2.3.3.9 - Malate synthase / Malic-condensing enzyme; Malate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGCTCCCCGATGCTGCTGTCAACACCGCAACAATACGACCTGTGCATA
Internal bar code:CATTCGATCAGGTTTGGGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:1784
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:59
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCATGATTGGGGACTGGT
Suggested primer 2:GAGCGTCCTTTGACCAGGAA