Insertion junction: CLIP2.078968_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.078968
Chromosome:chromosome 3
Location:397306
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144807 MAS1 (1 of 1) 2.3.3.9 - Malate synthase / Malic-condensing enzyme; Malate synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGCAGCGACAAGCAGCGGCGGTCAGCAAGGCGCTTCAAGTTAGCGCC
Internal bar code:CATTCGATCAGGTTTGGGATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:909
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCGTCCTTTGACCAGGAA
Suggested primer 2:CTGCATGATTGGGGACTGGT