Insertion junction: CLIP2.078973_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.078973
Chromosome:chromosome 9
Location:5195574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801068 (1 of 5) 2.4.1.17 - Glucuronosyltransferase / Uridine diphosphoglucuronyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCAGCGTTCGCTGCAAGGCTGTGCGTGTGCGGTCCGCAATGTTTCGCA
Internal bar code:CGACAGTGAGAAGACTTCGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:937
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATTGCTGTCAACTCGCG
Suggested primer 2:CAGGTTGGACTCCCATAGCG