Insertion junction: CLIP2.078990_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.078990
Chromosome:chromosome 7
Location:4405518
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre07.g343101 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGACGTCAAATTCTTTGGTGGGTCTCTTTGGGGCTTATGACTATGTTC
Internal bar code:GCTGTTGTATGTCGGTTAAGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1336
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGAACGAACTCACCTCC
Suggested primer 2:CTGCTGCCGCCATTTCTTTT