Insertion junction: CLIP2.078992_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.078992
Chromosome:chromosome 3
Location:3082241
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g164150 (1 of 12) IPR003439//IPR003593//IPR027417 - ABC transporter-like // AAA+ ATPase domain // P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCCGACTACCCTACTACAGACAAAACGGTTGCCAAAGAAGGTACTCTC
Internal bar code:TTTCAGCGAGCGCCTAAGCACT

Confirmation - LEAP-Seq

LEAP-Seq distance:447
LEAP-Seq percent confirming:19.5122
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTATGATGCACACGCCG
Suggested primer 2:CCAGCTATGGTAGTCTGCGG