Insertion junction: CLIP2.078999_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.078999
Chromosome:chromosome 11
Location:2176321
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467736 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGTGTGGGCACGGTACGGCATTGCAAGCAACAGGCTGTTACGTGCGC
Internal bar code:GGAAGTTGTGACTAAAGCAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1373
LEAP-Seq percent confirming:92.8571
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GAGCAGTTCTTGATGGGGCT
Suggested primer 2:TCAGACGGTGGAATGTGGTG