Insertion junction: CLIP2.079003_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.079003
Chromosome:chromosome 16
Location:885896
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g648100 (1 of 1) K05757 - actin related protein 2/3 complex, subunit 1A/1B (ARPC1A_B) 3'UTR
Cre16.g801886 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGAGGGCCCACCTTGCCGCCCATACCTTGAAACACTATTGTGATTAGC
Internal bar code:GGGTCATTCTACCGACACAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1131
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGTGTGTGTGTGTGTGT
Suggested primer 2:CACCTCAACACCTCCAGTCC