Insertion junction: CLIP2.079021_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079021
Chromosome:chromosome 3
Location:2374798
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g158450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTACAATCTGGTTGTAACCGTCTTATCCATCAAGGGCGGCCCCAGCATC
Internal bar code:TTGACGCACATCGACATTGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1603
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CATCTGCGCAAAGTACGAGC
Suggested primer 2:CGCCATCAAGGTTGCGTATG