Insertion junction: CLIP2.079024_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079024
Chromosome:chromosome 2
Location:6361385
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g387900 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTCGCGGGTGGCGAGTCGGCAGCGCAGCAGCAGGTGGCTGGAGCACCAG
Internal bar code:TGTTGGCCGATTATGCCAGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1310
LEAP-Seq percent confirming:40.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACACCCAGAACGCTAAG
Suggested primer 2:CTCACACGTGTATGACCCCG