Insertion junction: CLIP2.079024_5

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079024
Chromosome:chromosome 12
Location:2448609
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507558 (1 of 1) 3.5.1.3 - Omega-amidase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTATTTAAGAATTATACTTGTAAACCTCACACTGGAGGCCGCTCGGAT
Internal bar code:AGTTTAGTGCGTCTCCAACGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:3012
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:ATGCCCAGACCTTTCTTCCG
Suggested primer 2:GGTGGTGGTGTGTCGTGTAT