Insertion junction: CLIP2.079026_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079026
Chromosome:chromosome 15
Location:1675948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750797 (1 of 6) IPR000104//IPR000719//IPR002290//IPR011009//IPR020635 - Antifreeze protein, type I // Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAAAACAGATAGTTTATACACGCGGCTTGATTTGATTGCAAAAGGCAA
Internal bar code:CTACGTTGAGTAATGTAAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1784
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCAAGTTGTGCGGTTTCCAT
Suggested primer 2:ACCAGCGTCACGTTACGATT