Insertion junction: CLIP2.079034_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079034
Chromosome:chromosome 16
Location:746248
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690900 RBL8 rhomboid-like protein; (1 of 4) PTHR22936//PTHR22936:SF32 - RHOMBOID-RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAGCTATACAGTTTTAGTTATATTGGCCAGCATGTGCGCAGGCTTGAA
Internal bar code:TTAGCTCGTCCATTCCCAGACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1321
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGACACGTGAAATGGAGA
Suggested primer 2:CAGGCTTTGATGGAGCTGGA