Insertion junction: CLIP2.079034_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079034
Chromosome:chromosome 16
Location:746251
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g690900 RBL8 rhomboid-like protein; (1 of 4) PTHR22936//PTHR22936:SF32 - RHOMBOID-RELATED // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATATATACGGCTGGCGACCCCTGTAAACCAAACGGCATCCAGCGCAT
Internal bar code:GGCTGGTCCGTCGTGGGTAGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:758
LEAP-Seq percent confirming:17.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGCTTTGATGGAGCTGGA
Suggested primer 2:TGCGACACGTGAAATGGAGA