Insertion junction: CLIP2.079038_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079038
Chromosome:chromosome 10
Location:5124401
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455300 SMP1 (1 of 1) K11088 - small nuclear ribonucleoprotein D3 (SNRPD3, SMD3); Small nuclear ribonucleoprotein SmD3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGATGGAGGGGTGTGCACGCGCATGCATGAGGCGCGGCGTGCACGCT
Internal bar code:TGAGCTGTTTTAAGTGGTCTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:520
LEAP-Seq percent confirming:59.4595
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATTGTGGTGTTGCATGG
Suggested primer 2:GAGAGATGTACCGTGGCGAG