Insertion junction: CLIP2.079042_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.079042
Chromosome:chromosome 9
Location:1584617
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g398900 CWP1,GP1 (1 of 80) IPR003882 - Pistil-specific extensin-like protein; Vegetative cell wall protein gp1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCGGCTCCTCCTTCGCCGGCTCCTCCATCGCCGGGCCCTCCATCGCCG
Internal bar code:AGTCCCAGTACCACCTAGCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:135
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAAGGAGAAGGAGAGGGGGT
Suggested primer 2:GCCAGATAGGACACAGGAGC