Insertion junction: CLIP2.079044_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.079044
Chromosome:chromosome 16
Location:2848557
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801921 (1 of 1) K12946 - signal peptidase complex subunit 1 (SPCS1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCATCGACCCTCTGGCCCCTCGAGTGAGCTCCCCAAACTGCAACATCAT
Internal bar code:GGACAAAGGAGGCGTTTTTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1547
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:84

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTAGAGGTGGACGAGAA
Suggested primer 2:CACACAGCCCTCACGAATCT