Insertion junction: CLIP2.079047_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079047
Chromosome:chromosome 2
Location:8573652
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre02.g141050 AGO1 (1 of 2) K11593 - eukaryotic translation initiation factor 2C (ELF2C, AGO); Argonaute-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGATGGGGCCTTGCGGGGCAGGGCGGGAAGAGGCACAGGCAAAAGGAGG
Internal bar code:GGTGTCGAAGGTGCTTATCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:282
LEAP-Seq percent confirming:5.55556
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:17
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGATGTGCACACTACGTT
Suggested primer 2:CCGACTACATCCGTACAGCC