Insertion junction: CLIP2.079049_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.079049
Chromosome:chromosome 17
Location:1405326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g706200 (1 of 1) IPR006029//IPR006201 - Neurotransmitter-gated ion-channel transmembrane domain // Neurotransmitter-gated ion-channel 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAGTCACCCAGTTAACTGCATTATGCACATAGTTATTGATATATAGTAT
Internal bar code:CACATAGCCCTAGTCATGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1330
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:AGACCTGGCTACGGTGTTTG
Suggested primer 2:ACGGTCACCACTTCATTCCC