Insertion junction: CLIP2.079053_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.079053
Chromosome:chromosome 9
Location:4599741
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801059 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCAAGACATTGTTCGCCCGGTTTTGGGGCGGGTTTTGTCCCAATTCC
Internal bar code:ACGCTGATTCTCAGTTTATCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2442
LEAP-Seq percent confirming:36.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTACCACGACCACAGCAG
Suggested primer 2:TGTGTGTGTGTGTGTGTGGA