Insertion junction: CLIP2.079055_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079055
Chromosome:chromosome 1
Location:2967915
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018650 (1 of 1) PF01342//PF13771 - SAND domain (SAND) // PHD-like zinc-binding domain (zf-HC5HC2H) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGAAAGGCCTGCTTGGGCGTGCGGGGGGTGAACGCAAGCAGCGCTTTAG
Internal bar code:TATGCGCGGCATCTGACCAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2989
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGGAGAGAATTGGCAGCC
Suggested primer 2:AATGGCAGTGAACCGTTTGC