Insertion junction: CLIP2.079058_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.079058
Chromosome:plastome
Location:160092
Confidence (%):40
Locus systematic id Locus common name Defline Feature
CreCp.g802323 2717034,atpB,ChreCp058 (1 of 1) K02112 - F-type H+-transporting ATPase subunit beta (ATPF1B, atpD); ATPase beta chain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCTACTTTTGAATCAGATAAGTTCTTTTCAACAATAACACCAGATTCT
Internal bar code:TACTGCAATGAACATGATGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:134
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGAAGGAGGAGGTTCTT
Suggested primer 2:ATGTTGTAGCAGGAGCAGGG