Insertion junction: CLIP2.079067_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.079067
Chromosome:chromosome 1
Location:6378620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g045200 (1 of 1) 5.3.99.6 - Allene-oxide cyclase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTTGCCAGGGAGCGTGCATGAGCGCCATGTCGCTCCAACAGGCTCCTC
Internal bar code:CTGTGTCGTTAGTCGTGAGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1175
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCATACATAGGGCGGGTGAC
Suggested primer 2:CACGTCTCCGTCCTTGTGAA