Insertion junction: CLIP2.079068_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.079068
Chromosome:chromosome 1
Location:2647592
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g016001 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGCAATCATTGGCTCTGAAGGCCTCCAGCGCCCCAACTCAGCTGCCGC
Internal bar code:GCGACGGTCCTGCTTACTCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1237
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:30
LEAP-Seq n unique pos:36

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGCTTGAACTACGGGAG
Suggested primer 2:CTAGGCCGACATGTGTGTGT