Insertion junction: CLIP2.079072_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.079072
Chromosome:chromosome 1
Location:5817985
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre01.g041667 (1 of 12) 3.6.3.8 - Calcium-transporting ATPase / Calcium-translocating P-type ATPase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGTGTGTGGGGATGTTGGGGATATCAATCATACGGGTGACTGGTACGGC
Internal bar code:ATTCACTATGGGTTATCTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:176
LEAP-Seq percent confirming:61.5385
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTTTGCACTCAAGAACA
Suggested primer 2:GTGTGTGGAGGGTATGGGTG